Mr. Msangi, Pharmacist under EHP project in Kilosa District Hospital giving out medications to a client 
The Benjamin William Mkapa HIV/AIDS Foundation organizational structure was first developed in 2006 during the inception of the Foundation when it was implementing its first initiative namely the Mkapa Fellows Programme. A revised organizational structure was approved by the Board of Directors in 2008 to enable the institution effectively deliver its defined strategic goals and mission. The revision takes into consideration the changing external and internal environment. It is flexible and enhances effective linkage and cross fertilization between the technical and support services.
Below is the organization structure of BMAF as from 2008 todate:
The Manning level for each functional structure is as follows:
| S/N | Office Level | Positions | Number of Staff |
| 1. | Chief Executive Officer | Personal Secretary to CEO Audit (Out source) Legal (Outsource) | 2 |
| 2. | Directorate | Programmes & M&E Operations Services | 2 |
| 3. | Sections | HIV/AIDS Health Systems & Workforce Finance Human Resource & Administration Officers | 8 |
| 4. | Supporting Staff | Drivers Secretary Office attendant/registry | 4 |
| TOTAL | 16 |
